/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012077_1895019_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16995394 | 100.00 % | 8497697 | 100.00 % | 8497697 | 100.00 % |
| General Reads | 8887362 | 52.29 % | 4478094 | 52.70 % | 4409268 | 51.89 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 5 | 0.00 % | 2 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 8108027 | 47.71 % | 4019601 | 47.30 % | 4088426 | 48.11 % |
| Bisulfite_reads C2T | 4581092 | 26.95 % | 2307425 | 27.15 % | 2273667 | 26.76 % |
| Bisulfite_reads G2A | 4306275 | 25.34 % | 2170671 | 25.54 % | 2135604 | 25.13 % |
| Concept | Value |
|---|---|
| Unique Fragments | 3443966 |
| Average Unique | 40.53 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 378390795 | 28.91 % | 176271219 | 26.94 % | 202119576 | 30.89 % |
| Base Counts Overall C | 263965393 | 20.17 % | 113916910 | 17.41 % | 150048483 | 22.93 % |
| Base Counts Overall G | 271316317 | 20.73 % | 153404983 | 23.44 % | 117911334 | 18.02 % |
| Base Counts Overall T | 377706830 | 28.86 % | 202112501 | 30.89 % | 175594329 | 26.84 % |
| Base Counts Overall N | 17266003 | 1.32 % | 8617056 | 1.32 % | 8648947 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 4239202 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8497697 |
| 76 | 8497697 |
| Insert Size Histogram |
|---|
 |