/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012078_1895020_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 16689240 | 100.00 % | 8344620 | 100.00 % | 8344620 | 100.00 % |
| General Reads | 7402554 | 44.36 % | 3736165 | 44.77 % | 3666389 | 43.94 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 6 | 0.00 % | 3 | 0.00 % | 3 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 9286680 | 55.64 % | 4608452 | 55.23 % | 4678228 | 56.06 % |
| Bisulfite_reads C2T | 3815860 | 22.86 % | 1925037 | 23.07 % | 1890823 | 22.66 % |
| Bisulfite_reads G2A | 3586700 | 21.49 % | 1811131 | 21.70 % | 1775569 | 21.28 % |
| Concept | Value |
|---|---|
| Unique Fragments | 2829735 |
| Average Unique | 33.91 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 364602766 | 28.37 % | 170620383 | 26.55 % | 193982383 | 30.19 % |
| Base Counts Overall C | 267851617 | 20.84 % | 119760518 | 18.64 % | 148091099 | 23.05 % |
| Base Counts Overall G | 274590519 | 21.37 % | 151784508 | 23.62 % | 122806011 | 19.11 % |
| Base Counts Overall T | 361071967 | 28.10 % | 191908442 | 29.87 % | 169163525 | 26.33 % |
| Base Counts Overall N | 16954611 | 1.32 % | 8461889 | 1.32 % | 8492722 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 3504180 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 8344620 |
| 76 | 8344620 |
| Insert Size Histogram |
|---|
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