/EXTERNAL BLUEPRINT/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs/EXTERNAL-K012114_1895056_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 43113668 | 100.00 % | 21556834 | 100.00 % | 21556834 | 100.00 % |
| General Reads | 27932746 | 64.79 % | 14099372 | 65.41 % | 13833374 | 64.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 12 | 0.00 % | 5 | 0.00 % | 7 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 15180910 | 35.21 % | 7457457 | 34.59 % | 7723453 | 35.83 % |
| Bisulfite_reads C2T | 14410498 | 33.42 % | 7272233 | 33.74 % | 7138265 | 33.11 % |
| Bisulfite_reads G2A | 13522260 | 31.36 % | 6827144 | 31.67 % | 6695116 | 31.06 % |
| Concept | Value |
|---|---|
| Unique Fragments | 10435254 |
| Average Unique | 48.41 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 1068666096 | 32.19 % | 458861195 | 27.64 % | 609804901 | 36.74 % |
| Base Counts Overall C | 576439153 | 17.36 % | 193281283 | 11.64 % | 383157870 | 23.08 % |
| Base Counts Overall G | 592696696 | 17.85 % | 393609644 | 23.71 % | 199087052 | 11.99 % |
| Base Counts Overall T | 1038189285 | 31.27 % | 592277573 | 35.68 % | 445911712 | 26.86 % |
| Base Counts Overall N | 43761206 | 1.32 % | 21846523 | 1.32 % | 21914683 | 1.32 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 13013003 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 21556834 |
| 76 | 21556834 |
| Insert Size Histogram |
|---|
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