/EXTERNAL BLUEPRINT/methylation/K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs
BACK
SAMPLE K012037_K012072_K012073_K012074_K012075_K012076_K012077_K012078_K012114_K012115_10_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
18880016 |
70836 |
0.38 % |
| NonRefCpG |
840625 |
146 |
0.02 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
3266397 |
12.84 % |
4387 |
2.36 % |
276844 |
26.53 % |
92 |
8.55 % |
| Intermediate (0.3-0.7) |
8846183 |
34.79 % |
33508 |
18.05 % |
387084 |
37.09 % |
265 |
24.64 % |
| Methylated (0.7-1) |
13318416 |
52.37 % |
147727 |
79.58 % |
379672 |
36.38 % |
719 |
66.81 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.710 |
|
0.870 |
|
0.560 |
|
0.820 |
|