/EXTERNAL BLUEPRINT/K012039_K012080_K012081_K012082_K012083_K012084_K012085_K012086_K012087_K012118_K012119_11_lane_gembs/EXTERNAL-K012086_1895028_2
BACK
SAMPLE K012039_K012080_K012081_K012082_K012083_K012084_K012085_K012086_K012087_K012118_K012119_11_lane_gembs LANE EXTERNAL-K012086_1895028_2
Mapping Stats (Reads)
| Concept | Total Reads | % |
Pair One Reads | % | Pair Two Reads | % |
| Sequenced Reads | 19835494 | 100.00 % | 9917747 | 100.00 % | 9917747 | 100.00 % |
| General Reads | 14341578 | 72.30 % | 7208975 | 72.69 % | 7132603 | 71.92 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 16 | 0.00 % | 8 | 0.00 % | 8 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5493900 | 27.70 % | 2708764 | 27.31 % | 2785136 | 28.08 % |
| Bisulfite_reads C2T | 7408542 | 37.35 % | 3723297 | 37.54 % | 3685245 | 37.16 % |
| Bisulfite_reads G2A | 6933052 | 34.95 % | 3485686 | 35.15 % | 3447366 | 34.76 % |
Uniqueness (Fragments)
| Concept | Value |
| Unique Fragments | 5645449 |
| Average Unique | 56.92 % |
Mapping Stats (Bases)
| Concept | Total Bases | % |
Pair One Bases | % | Pair Two Bases | % |
| Base Counts Overall A | 468653908 | 30.68 % | 209915116 | 27.49 % | 258738792 | 33.88 % |
| Base Counts Overall C | 281511912 | 18.43 % | 107792991 | 14.12 % | 173718921 | 22.75 % |
| Base Counts Overall G | 289207372 | 18.94 % | 177232812 | 23.21 % | 111974560 | 14.66 % |
| Base Counts Overall T | 467845808 | 30.63 % | 258672625 | 33.87 % | 209173183 | 27.39 % |
| Base Counts Overall N | 20114038 | 1.32 % | 10052975 | 1.32 % | 10061063 | 1.32 % |
Bisulfite Conversion Rate
| Bisulfite Conversion Type | Conversion Rate |
| Conversion Rate | NA |
| Over Conversion Rate | NA |
Correct Pairs
| Concept | Total Reads |
| Correct Pairs | 6914225 |
Mapping Quality
| Mapping Quality Histogram |
 |
Read Length
| Read Length | Reads |
| 76 | 9917747 |
| 76 | 9917747 |
Insert Size Plot
| Insert Size Histogram |
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