/EXTERNAL BLUEPRINT/K012137_1_lane_gembs/EXTERNAL-K012137_1895079_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 125036722 | 100.00 % | 62518361 | 100.00 % | 62518361 | 100.00 % |
| General Reads | 119837070 | 95.84 % | 60189434 | 96.27 % | 59647636 | 95.41 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5199652 | 4.16 % | 2328927 | 3.73 % | 2870725 | 4.59 % |
| Bisulfite_reads C2T | 62015529 | 49.60 % | 31140998 | 49.81 % | 30874531 | 49.38 % |
| Bisulfite_reads G2A | 57821541 | 46.24 % | 29048436 | 46.46 % | 28773105 | 46.02 % |
| Concept | Value |
|---|---|
| Unique Fragments | 45429174 |
| Average Unique | 72.67 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 3433274065 | 35.66 % | 1320816394 | 27.44 % | 2112457671 | 43.88 % |
| Base Counts Overall C | 1336064282 | 13.88 % | 141905739 | 2.95 % | 1194158543 | 24.81 % |
| Base Counts Overall G | 1376739840 | 14.30 % | 1202066778 | 24.97 % | 174673062 | 3.63 % |
| Base Counts Overall T | 3354749171 | 34.84 % | 2085376563 | 43.32 % | 1269372608 | 26.37 % |
| Base Counts Overall N | 127000236 | 1.32 % | 63748323 | 1.32 % | 63251913 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 55728771 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 62518361 |
| 76 | 62518361 |
| Insert Size Histogram |
|---|
 |