/EXTERNAL BLUEPRINT/K012133_1_lane_gembs/EXTERNAL-K012133_1895075_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 80052522 | 100.00 % | 40026261 | 100.00 % | 40026261 | 100.00 % |
| General Reads | 74853107 | 93.50 % | 37594865 | 93.93 % | 37258242 | 93.08 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5199415 | 6.50 % | 2431396 | 6.07 % | 2768019 | 6.92 % |
| Bisulfite_reads C2T | 38685179 | 48.32 % | 19425238 | 48.53 % | 19259941 | 48.12 % |
| Bisulfite_reads G2A | 36167928 | 45.18 % | 18169627 | 45.39 % | 17998301 | 44.97 % |
| Concept | Value |
|---|---|
| Unique Fragments | 27788654 |
| Average Unique | 69.43 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 2133246798 | 34.61 % | 816010851 | 26.48 % | 1317235947 | 42.74 % |
| Base Counts Overall C | 919361661 | 14.91 % | 122374884 | 3.97 % | 796986777 | 25.86 % |
| Base Counts Overall G | 945146580 | 15.33 % | 798008806 | 25.89 % | 147137774 | 4.77 % |
| Base Counts Overall T | 2085652787 | 33.84 % | 1305407663 | 42.36 % | 780245124 | 25.32 % |
| Base Counts Overall N | 80636368 | 1.31 % | 40219893 | 1.30 % | 40416475 | 1.31 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | NA |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 34367786 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 76 | 40026261 |
| 76 | 40026261 |
| Insert Size Histogram |
|---|
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