/EXTERNAL CREST/K006454_1_lane_gembs/COC6.Bisulfite-Seq.DNA_Methylation.JGAX00000012146_5

BACK

SAMPLE K006454_1_lane_gembs LANE COC6.Bisulfite-Seq.DNA_Methylation.JGAX00000012146_5

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1325334642 100.00 % 1325334642 100.00 % 0 0.00 %
General Reads 1191230100 89.88 % 1191230100 89.88 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 15821315 1.19 % 15821315 1.19 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 118283227 8.92 % 118283227 8.92 % 0 0.00 %
Bisulfite_reads C2T 599195742 45.21 % 599195742 45.21 % 0 0.00 %
Bisulfite_reads G2A 607855673 45.86 % 607855673 45.86 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 939220977
Average Unique 77.81 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 60575932938 45.25 %
Base Counts Overall C 28493636052 21.29 %
Base Counts Overall G 4966820478 3.71 %
Base Counts Overall T 38469746527 28.74 %
Base Counts Overall N 1352662847 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9008691694231217
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC6.Bisulfite-Seq.DNA_Methylation.JGAX00000012146_5.mapq.png



Read Length

Read Length Reads
100 1325334642