/EXTERNAL CREST/K006460_1_lane_gembs/COC16.Bisulfite-Seq.DNA_Methylation.JGAX00000012152_4

BACK

SAMPLE K006460_1_lane_gembs LANE COC16.Bisulfite-Seq.DNA_Methylation.JGAX00000012152_4

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1799931716 100.00 % 1799931716 100.00 % 0 0.00 %
General Reads 1460164785 81.12 % 1460164785 81.12 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 18506083 1.03 % 18506083 1.03 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 321260848 17.85 % 321260848 17.85 % 0 0.00 %
Bisulfite_reads C2T 733591692 40.76 % 733591692 40.76 % 0 0.00 %
Bisulfite_reads G2A 745079176 41.39 % 745079176 41.39 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 1100180070
Average Unique 74.40 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 82204404787 45.22 %
Base Counts Overall C 39191452330 21.56 %
Base Counts Overall G 9451185808 5.20 %
Base Counts Overall T 49101911605 27.01 %
Base Counts Overall N 1844148786 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.886164607286326
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC16.Bisulfite-Seq.DNA_Methylation.JGAX00000012152_4.mapq.png



Read Length

Read Length Reads
100 1799931716