/EXTERNAL CREST/K006461_1_lane_gembs/COC20.Bisulfite-Seq.DNA_Methylation.JGAX00000012153_3

BACK

SAMPLE K006461_1_lane_gembs LANE COC20.Bisulfite-Seq.DNA_Methylation.JGAX00000012153_3

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1563184999 100.00 % 1563184999 100.00 % 0 0.00 %
General Reads 1279325722 81.84 % 1279325722 81.84 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 11920339 0.76 % 11920339 0.76 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 271938938 17.40 % 271938938 17.40 % 0 0.00 %
Bisulfite_reads C2T 642564347 41.11 % 642564347 41.11 % 0 0.00 %
Bisulfite_reads G2A 648681714 41.50 % 648681714 41.50 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 928655390
Average Unique 71.92 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 72062874038 45.64 %
Base Counts Overall C 33816832125 21.42 %
Base Counts Overall G 7862765169 4.98 %
Base Counts Overall T 42540723749 26.94 %
Base Counts Overall N 1598489818 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8777822158508781
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC20.Bisulfite-Seq.DNA_Methylation.JGAX00000012153_3.mapq.png



Read Length

Read Length Reads
100 1563184999