/EXTERNAL CREST/K006459_1_lane_gembs/COC15.Bisulfite-Seq.DNA_Methylation.JGAX00000012151_2

BACK

SAMPLE K006459_1_lane_gembs LANE COC15.Bisulfite-Seq.DNA_Methylation.JGAX00000012151_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1561889454 100.00 % 1561889454 100.00 % 0 0.00 %
General Reads 1303016627 83.43 % 1303016627 83.43 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 13498274 0.86 % 13498274 0.86 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 245374553 15.71 % 245374553 15.71 % 0 0.00 %
Bisulfite_reads C2T 654093514 41.88 % 654093514 41.88 % 0 0.00 %
Bisulfite_reads G2A 662421387 42.41 % 662421387 42.41 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 992736250
Average Unique 75.41 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 71472190018 45.31 %
Base Counts Overall C 33881677101 21.48 %
Base Counts Overall G 7604101380 4.82 %
Base Counts Overall T 43207294412 27.39 %
Base Counts Overall N 1585571943 1.01 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.8909207957567548
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
COC15.Bisulfite-Seq.DNA_Methylation.JGAX00000012151_2.mapq.png



Read Length

Read Length Reads
100 1561889454