/EXTERNAL CREST/K006457_1_lane_gembs/COC11.Bisulfite-Seq.DNA_Methylation.JGAX00000012149_7

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SAMPLE K006457_1_lane_gembs LANE COC11.Bisulfite-Seq.DNA_Methylation.JGAX00000012149_7

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	2110223561	100.00 %	2110223561	100.00 %	0	0.00 %
General Reads	1876290493	88.91 %	1876290493	88.91 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	24757201	1.17 %	24757201	1.17 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	209175867	9.91 %	209175867	9.91 %	0	0.00 %
Bisulfite_reads C2T	941704890	44.63 %	941704890	44.63 %	0	0.00 %
Bisulfite_reads G2A	959342804	45.46 %	959342804	45.46 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	1473547965
Average Unique	77.51 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	97360910864	45.68 %
Base Counts Overall C	45354078939	21.28 %
Base Counts Overall G	8166470813	3.83 %
Base Counts Overall T	60108654780	28.20 %
Base Counts Overall N	2142464265	1.01 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.895369120312467
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
100	2110223561