/cemt/A56419_3_lane_gembs/HGJ2KCCXY_5_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 289992058 | 100.00 % | 144996029 | 100.00 % | 144996029 | 100.00 % |
| General Reads | 252996825 | 87.24 % | 128059748 | 88.32 % | 124937077 | 86.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 31849242 | 10.98 % | 16077411 | 11.09 % | 15771831 | 10.88 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 5145991 | 1.77 % | 858870 | 0.59 % | 4287121 | 2.96 % |
| Bisulfite_reads C2T | 144244728 | 49.74 % | 72968723 | 50.32 % | 71276005 | 49.16 % |
| Bisulfite_reads G2A | 140601339 | 48.48 % | 71168436 | 49.08 % | 69432903 | 47.89 % |
| Concept | Value |
|---|---|
| Unique Fragments | 124537793 |
| Average Unique | 85.89 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 17205831123 | 39.29 % | 7527519417 | 34.38 % | 9678311706 | 44.20 % |
| Base Counts Overall C | 4513866573 | 10.31 % | 129847776 | 0.59 % | 4384018797 | 20.02 % |
| Base Counts Overall G | 4520200276 | 10.32 % | 4368528612 | 19.95 % | 151671664 | 0.69 % |
| Base Counts Overall T | 17255749655 | 39.41 % | 9722198258 | 44.40 % | 7533551397 | 34.41 % |
| Base Counts Overall N | 293153131 | 0.67 % | 146306316 | 0.67 % | 146846815 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9939190855268804 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 136758385 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 144996029 |
| 150 | 144996029 |
| Insert Size Histogram |
|---|
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