/cemt/A56419_3_lane_gembs/HKNHLALXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 311310058 | 100.00 % | 155655029 | 100.00 % | 155655029 | 100.00 % |
| General Reads | 273492610 | 87.85 % | 137629169 | 88.42 % | 135863441 | 87.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 34138757 | 10.97 % | 17144890 | 11.01 % | 16993867 | 10.92 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3678691 | 1.18 % | 880970 | 0.57 % | 2797721 | 1.80 % |
| Bisulfite_reads C2T | 155793470 | 50.04 % | 78355578 | 50.34 % | 77437892 | 49.75 % |
| Bisulfite_reads G2A | 151837897 | 48.77 % | 76418481 | 49.09 % | 75419416 | 48.45 % |
| Concept | Value |
|---|---|
| Unique Fragments | 135475384 |
| Average Unique | 87.04 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 18422433896 | 39.19 % | 8079127872 | 34.37 % | 10343306024 | 44.01 % |
| Base Counts Overall C | 4869095535 | 10.36 % | 123612870 | 0.53 % | 4745482665 | 20.19 % |
| Base Counts Overall G | 4861424179 | 10.34 % | 4690713193 | 19.96 % | 170710986 | 0.73 % |
| Base Counts Overall T | 18534861364 | 39.43 % | 10452501167 | 44.47 % | 8082360197 | 34.39 % |
| Base Counts Overall N | 320003784 | 0.68 % | 157954277 | 0.67 % | 162049507 | 0.69 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9935839572769286 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 148665825 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 155655029 |
| 150 | 155655029 |
| Insert Size Histogram |
|---|
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