/cemt/A77947_1_lane_gembs/H5235CCXY_1_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 973914438 | 100.00 % | 486957219 | 100.00 % | 486957219 | 100.00 % |
| General Reads | 856950350 | 87.99 % | 432510956 | 88.82 % | 424439394 | 87.16 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 7044881 | 0.72 % | 3548971 | 0.73 % | 3495910 | 0.72 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 109919207 | 11.29 % | 50897292 | 10.45 % | 59021915 | 12.12 % |
| Bisulfite_reads C2T | 440628815 | 45.24 % | 222324081 | 45.66 % | 218304734 | 44.83 % |
| Bisulfite_reads G2A | 423366416 | 43.47 % | 213735846 | 43.89 % | 209630570 | 43.05 % |
| Concept | Value |
|---|---|
| Unique Fragments | 379373764 |
| Average Unique | 77.91 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 55546345193 | 37.77 % | 22572724467 | 30.70 % | 32973620726 | 44.84 % |
| Base Counts Overall C | 17303409416 | 11.77 % | 2203185668 | 3.00 % | 15100223748 | 20.54 % |
| Base Counts Overall G | 16943073319 | 11.52 % | 14590774172 | 19.84 % | 2352299147 | 3.20 % |
| Base Counts Overall T | 56274196608 | 38.27 % | 33666578305 | 45.79 % | 22607618303 | 30.75 % |
| Base Counts Overall N | 994055602 | 0.68 % | 497277457 | 0.68 % | 496778145 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.99229603512398 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 419290408 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 486957219 |
| 150 | 486957219 |
| Insert Size Histogram |
|---|
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