/CEMT/A77948_3_lane_gembs/H5235CCXY_2_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 933652066 | 100.00 % | 466826033 | 100.00 % | 466826033 | 100.00 % |
| General Reads | 667758288 | 71.52 % | 334965299 | 71.75 % | 332792989 | 71.29 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 836362 | 0.09 % | 419270 | 0.09 % | 417092 | 0.09 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 265057416 | 28.39 % | 131441464 | 28.16 % | 133615952 | 28.62 % |
| Bisulfite_reads C2T | 341539045 | 36.58 % | 171272646 | 36.69 % | 170266399 | 36.47 % |
| Bisulfite_reads G2A | 327055605 | 35.03 % | 164111923 | 35.15 % | 162943682 | 34.90 % |
| Concept | Value |
|---|---|
| Unique Fragments | 284515956 |
| Average Unique | 60.95 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 49186961087 | 34.89 % | 20380111210 | 28.91 % | 28806849877 | 40.87 % |
| Base Counts Overall C | 20568810260 | 14.59 % | 4860359798 | 6.90 % | 15708450462 | 22.28 % |
| Base Counts Overall G | 20457684506 | 14.51 % | 15350830853 | 21.78 % | 5106853653 | 7.24 % |
| Base Counts Overall T | 49818702988 | 35.34 % | 29423879691 | 41.74 % | 20394823297 | 28.93 % |
| Base Counts Overall N | 949303125 | 0.67 % | 475549431 | 0.67 % | 473753694 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.914729348770396 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 319185314 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 466826033 |
| 150 | 466826033 |
| Insert Size Histogram |
|---|
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