/CEMT/A77948_3_lane_gembs/HGNYFCCXY_1_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 901902100 | 100.00 % | 450951050 | 100.00 % | 450951050 | 100.00 % |
| General Reads | 630865767 | 69.95 % | 317008349 | 70.30 % | 313857418 | 69.60 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 787295 | 0.09 % | 395694 | 0.09 % | 391601 | 0.09 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 270249038 | 29.96 % | 133547007 | 29.61 % | 136702031 | 30.31 % |
| Bisulfite_reads C2T | 322574145 | 35.77 % | 162059853 | 35.94 % | 160514292 | 35.59 % |
| Bisulfite_reads G2A | 309078917 | 34.27 % | 155344190 | 34.45 % | 153734727 | 34.09 % |
| Concept | Value |
|---|---|
| Unique Fragments | 267087606 |
| Average Unique | 59.23 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 47597115804 | 34.95 % | 19816956029 | 29.10 % | 27780159775 | 40.80 % |
| Base Counts Overall C | 19898052168 | 14.61 % | 4877018015 | 7.16 % | 15021034153 | 22.06 % |
| Base Counts Overall G | 20189337897 | 14.82 % | 14965043822 | 21.98 % | 5224294075 | 7.67 % |
| Base Counts Overall T | 47584192140 | 34.94 % | 27974048858 | 41.08 % | 19610143282 | 28.80 % |
| Base Counts Overall N | 918519091 | 0.67 % | 460541826 | 0.68 % | 457977265 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9099670198153164 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 299912896 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 450951050 |
| 150 | 450951050 |
| Insert Size Histogram |
|---|
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