/cemt/A70095_3_lane_gembs

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SAMPLE A70095_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1152853700 100.00 % 576426850 100.00 % 576426850 100.00 %
General Reads 1048142555 90.92 % 526101447 91.27 % 522041108 90.57 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 96460238 8.37 % 48369609 8.39 % 48090629 8.34 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8250907 0.72 % 1955794 0.34 % 6295113 1.09 %
Bisulfite_reads C2T 585555771 50.79 % 293788596 50.97 % 291767175 50.62 %
Bisulfite_reads G2A 559047022 48.49 % 280682460 48.69 % 278364562 48.29 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 507479884
Average Unique 88.04 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 67001352612 38.49 % 25928504647 29.79 % 41072847965 47.19 %
Base Counts Overall C 19264808710 11.07 % 987380941 1.13 % 18277427769 21.00 %
Base Counts Overall G 19174953887 11.01 % 18092865262 20.79 % 1082088625 1.24 %
Base Counts Overall T 67468169987 38.76 % 41448092143 47.62 % 26020077844 29.89 %
Base Counts Overall N 1171623504 0.67 % 583611357 0.67 % 588012147 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9907431210117852
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 557465903



Mapping Quality

Mapping Quality Histogram
A70095_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A70095_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HGJ2KCCXY_8_1
HG3C3ALXX_3_1
H25LJCCXY_1_1