/cemt/A75617_1_lane_gembs

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SAMPLE A75617_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1140825018 100.00 % 570412509 100.00 % 570412509 100.00 %
General Reads 1121847652 98.34 % 563467888 98.78 % 558379764 97.89 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 9964252 0.87 % 4999610 0.88 % 4964642 0.87 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 9013114 0.79 % 1945011 0.34 % 7068103 1.24 %
Bisulfite_reads C2T 576714936 50.55 % 289516471 50.76 % 287198465 50.35 %
Bisulfite_reads G2A 555096968 48.66 % 278951027 48.90 % 276145941 48.41 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 499922989
Average Unique 87.64 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 66972072671 38.88 % 26701562684 31.00 % 40270509987 46.75 %
Base Counts Overall C 18212191221 10.57 % 667341822 0.77 % 17544849399 20.37 %
Base Counts Overall G 18088877461 10.50 % 17306642282 20.09 % 782235179 0.91 %
Base Counts Overall T 67827770296 39.37 % 40875266934 47.46 % 26952503362 31.29 %
Base Counts Overall N 1163666069 0.68 % 581475137 0.68 % 582190932 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9954452446334306
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 550864351



Mapping Quality

Mapping Quality Histogram
A75617_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75617_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_1_1
HGJ2KCCXY_8_1