/cemt/A56420_3_lane_gembs/HKNHLALXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 143084520 | 100.00 % | 71542260 | 100.00 % | 71542260 | 100.00 % |
| General Reads | 139598143 | 97.56 % | 70140166 | 98.04 % | 69457977 | 97.09 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2059880 | 1.44 % | 1033802 | 1.45 % | 1026078 | 1.43 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 1426497 | 1.00 % | 368292 | 0.51 % | 1058205 | 1.48 % |
| Bisulfite_reads C2T | 72572627 | 50.72 % | 36447995 | 50.95 % | 36124632 | 50.49 % |
| Bisulfite_reads G2A | 69085396 | 48.28 % | 34725973 | 48.54 % | 34359423 | 48.03 % |
| Concept | Value |
|---|---|
| Unique Fragments | 61993292 |
| Average Unique | 86.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 8429513067 | 39.02 % | 3616437426 | 33.48 % | 4813075641 | 44.55 % |
| Base Counts Overall C | 2275474333 | 10.53 % | 75239919 | 0.70 % | 2200234414 | 20.37 % |
| Base Counts Overall G | 2281299041 | 10.56 % | 2172427669 | 20.11 % | 108871372 | 1.01 % |
| Base Counts Overall T | 8472259066 | 39.21 % | 4866117148 | 45.04 % | 3606141918 | 33.38 % |
| Base Counts Overall N | 147217013 | 0.68 % | 72659098 | 0.67 % | 74557915 | 0.69 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9892648338542905 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 68656698 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 71542260 |
| 150 | 71542260 |
| Insert Size Histogram |
|---|
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