/cemt/A63255_3_lane_gembs

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SAMPLE A63255_3_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1007705544 100.00 % 503852772 100.00 % 503852772 100.00 %
General Reads 982471291 97.50 % 495266842 98.30 % 487204449 96.70 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 11498260 1.14 % 5784134 1.15 % 5714126 1.13 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 13735993 1.36 % 2801796 0.56 % 10934197 2.17 %
Bisulfite_reads C2T 508263139 50.44 % 256127577 50.83 % 252135562 50.04 %
Bisulfite_reads G2A 485706412 48.20 % 244923399 48.61 % 240783013 47.79 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 434991490
Average Unique 86.33 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 59684716799 39.22 % 26256746179 34.51 % 33427970620 43.94 %
Base Counts Overall C 15718357340 10.33 % 531453356 0.70 % 15186903984 19.96 %
Base Counts Overall G 15875160194 10.43 % 15023107215 19.75 % 852052979 1.12 %
Base Counts Overall T 59863295710 39.34 % 33761241248 44.37 % 26102054462 34.31 %
Base Counts Overall N 1022007101 0.67 % 509220574 0.67 % 512786527 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9862209784174677
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 480433707



Mapping Quality

Mapping Quality Histogram
A63255_3_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A63255_3_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HGJ2KCCXY_5_1
H37HNALXX_4_1
HKNHLALXX_2_1