/cemt/A63255_3_lane_gembs/HKNHLALXX_2_1
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 186475186 | 100.00 % | 93237593 | 100.00 % | 93237593 | 100.00 % |
| General Reads | 182042467 | 97.62 % | 91585510 | 98.23 % | 90456957 | 97.02 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 2251006 | 1.21 % | 1130960 | 1.21 % | 1120046 | 1.20 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2181713 | 1.17 % | 521123 | 0.56 % | 1660590 | 1.78 % |
| Bisulfite_reads C2T | 94293185 | 50.57 % | 47420951 | 50.86 % | 46872234 | 50.27 % |
| Bisulfite_reads G2A | 90000288 | 48.26 % | 45295519 | 48.58 % | 44704769 | 47.95 % |
| Concept | Value |
|---|---|
| Unique Fragments | 80744429 |
| Average Unique | 86.60 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11044612810 | 39.22 % | 4853929546 | 34.48 % | 6190683264 | 43.97 % |
| Base Counts Overall C | 2908261921 | 10.33 % | 88202446 | 0.63 % | 2820059475 | 20.03 % |
| Base Counts Overall G | 2903460083 | 10.31 % | 2778995653 | 19.74 % | 124464430 | 0.88 % |
| Base Counts Overall T | 11109650947 | 39.46 % | 6263082631 | 44.49 % | 4846568316 | 34.42 % |
| Base Counts Overall N | 191767325 | 0.68 % | 94666267 | 0.67 % | 97101058 | 0.69 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9917030985725327 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 89225577 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 93237593 |
| 150 | 93237593 |
| Insert Size Histogram |
|---|
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