/Martin Hirst/PX0720_CCGTCC_10_lane_gembs/HF7JYCCXY_8_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 150982862 | 100.00 % | 75491431 | 100.00 % | 75491431 | 100.00 % |
| General Reads | 147518352 | 97.71 % | 74438367 | 98.61 % | 73079985 | 96.81 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 637243 | 0.42 % | 321458 | 0.43 % | 315785 | 0.42 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 2827267 | 1.87 % | 731606 | 0.97 % | 2095661 | 2.78 % |
| Bisulfite_reads C2T | 75296627 | 49.87 % | 37991539 | 50.33 % | 37305088 | 49.42 % |
| Bisulfite_reads G2A | 72858968 | 48.26 % | 36768286 | 48.71 % | 36090682 | 47.81 % |
| Concept | Value |
|---|---|
| Unique Fragments | 27793469 |
| Average Unique | 36.82 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 7882657173 | 34.58 % | 4048914073 | 35.52 % | 3833743100 | 33.63 % |
| Base Counts Overall C | 3360667607 | 14.74 % | 1806285931 | 15.85 % | 1554381676 | 13.64 % |
| Base Counts Overall G | 3774387780 | 16.56 % | 1735598237 | 15.23 % | 2038789543 | 17.89 % |
| Base Counts Overall T | 7626080152 | 33.45 % | 3731863401 | 32.74 % | 3894216751 | 34.16 % |
| Base Counts Overall N | 154619450 | 0.68 % | 76544439 | 0.67 % | 78075011 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9710011602636168 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 46816083 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 75491431 |
| 150 | 75491431 |
| Insert Size Histogram |
|---|
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