/CEMT/A75622_1_lane_gembs

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SAMPLE A75622_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1036708626 100.00 % 518354313 100.00 % 518354313 100.00 %
General Reads 1014721668 97.88 % 509503654 98.29 % 505218014 97.47 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 12522057 1.21 % 6283315 1.21 % 6238742 1.20 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 9464901 0.91 % 2567344 0.50 % 6897557 1.33 %
Bisulfite_reads C2T 524984454 50.64 % 263481050 50.83 % 261503404 50.45 %
Bisulfite_reads G2A 502259271 48.45 % 252305919 48.67 % 249953352 48.22 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 450561224
Average Unique 86.92 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 60700685582 38.78 % 24125808729 30.82 % 36574876853 46.73 %
Base Counts Overall C 16736152035 10.69 % 647643288 0.83 % 16088508747 20.55 %
Base Counts Overall G 16604715700 10.61 % 15821923440 20.21 % 782792260 1.00 %
Base Counts Overall T 61436126955 39.25 % 37137797761 47.45 % 24298329194 31.04 %
Base Counts Overall N 1065322254 0.68 % 538328045 0.69 % 526994209 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9950738976922493
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 499507657



Mapping Quality

Mapping Quality Histogram
A75622_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A75622_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HKNMNALXX_6_1