/TFF-PPG/PX0587_CTATAC_10_lane_gembs/HHCHCCCXY_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 223294626 | 100.00 % | 111647313 | 100.00 % | 111647313 | 100.00 % |
| General Reads | 214737784 | 96.17 % | 108941115 | 97.58 % | 105796669 | 94.76 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1673052 | 0.75 % | 850750 | 0.76 % | 822302 | 0.74 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6883790 | 3.08 % | 1855448 | 1.66 % | 5028342 | 4.50 % |
| Bisulfite_reads C2T | 110189218 | 49.35 % | 55892344 | 50.06 % | 54296874 | 48.63 % |
| Bisulfite_reads G2A | 106221618 | 47.57 % | 53899521 | 48.28 % | 52322097 | 46.86 % |
| Concept | Value |
|---|---|
| Unique Fragments | 46292348 |
| Average Unique | 41.46 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11792403305 | 34.97 % | 6101248201 | 36.19 % | 5691155104 | 33.76 % |
| Base Counts Overall C | 4830624097 | 14.33 % | 2547736916 | 15.11 % | 2282887181 | 13.54 % |
| Base Counts Overall G | 5340353435 | 15.84 % | 2467388535 | 14.64 % | 2872964900 | 17.04 % |
| Base Counts Overall T | 11528521785 | 34.19 % | 5629974619 | 33.39 % | 5898547166 | 34.99 % |
| Base Counts Overall N | 225585904 | 0.67 % | 112395992 | 0.67 % | 113189912 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9741502425967633 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 71313319 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 111647313 |
| 150 | 111647313 |
| Insert Size Histogram |
|---|
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