/TFF-PPG/PX0587_CTATAC_10_lane_gembs/HHCHCCCXY_7_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 225263926 | 100.00 % | 112631963 | 100.00 % | 112631963 | 100.00 % |
| General Reads | 216998061 | 96.33 % | 109864564 | 97.54 % | 107133497 | 95.12 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1686648 | 0.75 % | 856283 | 0.76 % | 830365 | 0.74 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6579217 | 2.92 % | 1911116 | 1.70 % | 4668101 | 4.14 % |
| Bisulfite_reads C2T | 111332698 | 49.42 % | 56361271 | 50.04 % | 54971427 | 48.81 % |
| Bisulfite_reads G2A | 107352011 | 47.66 % | 54359576 | 48.26 % | 52992435 | 47.05 % |
| Concept | Value |
|---|---|
| Unique Fragments | 46912010 |
| Average Unique | 41.65 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11901280118 | 34.99 % | 6150410566 | 36.16 % | 5750869552 | 33.81 % |
| Base Counts Overall C | 4882246692 | 14.35 % | 2570775914 | 15.12 % | 2311470778 | 13.59 % |
| Base Counts Overall G | 5375331797 | 15.80 % | 2492249488 | 14.65 % | 2883082309 | 16.95 % |
| Base Counts Overall T | 11628751222 | 34.19 % | 5680372304 | 33.40 % | 5948378918 | 34.98 % |
| Base Counts Overall N | 227242997 | 0.67 % | 113618141 | 0.67 % | 113624856 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9737450884930852 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 72295212 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 112631963 |
| 150 | 112631963 |
| Insert Size Histogram |
|---|
 |