/TFF-PPG/PX0587_CTATAC_10_lane_gembs/HHCHCCCXY_8_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 224518736 | 100.00 % | 112259368 | 100.00 % | 112259368 | 100.00 % |
| General Reads | 216181288 | 96.29 % | 109593555 | 97.63 % | 106587733 | 94.95 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1690665 | 0.75 % | 859495 | 0.77 % | 831170 | 0.74 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6646783 | 2.96 % | 1806318 | 1.61 % | 4840465 | 4.31 % |
| Bisulfite_reads C2T | 110931814 | 49.41 % | 56228530 | 50.09 % | 54703284 | 48.73 % |
| Bisulfite_reads G2A | 106940139 | 47.63 % | 54224520 | 48.30 % | 52715619 | 46.96 % |
| Concept | Value |
|---|---|
| Unique Fragments | 46736515 |
| Average Unique | 41.63 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 11867673627 | 35.01 % | 6142008117 | 36.23 % | 5725665510 | 33.78 % |
| Base Counts Overall C | 4859358921 | 14.33 % | 2561429395 | 15.11 % | 2297929526 | 13.56 % |
| Base Counts Overall G | 5366639227 | 15.83 % | 2474241891 | 14.60 % | 2892397336 | 17.06 % |
| Base Counts Overall T | 11582661436 | 34.16 % | 5660609247 | 33.39 % | 5922052189 | 34.94 % |
| Base Counts Overall N | 225995925 | 0.67 % | 112875918 | 0.67 % | 113120007 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9741132418408501 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 71976827 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 112259368 |
| 150 | 112259368 |
| Insert Size Histogram |
|---|
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