/TFF-PPG/PX0587_AGGCCG_10_lane_gembs/H3232CCXY_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 106699848 | 100.00 % | 53349924 | 100.00 % | 53349924 | 100.00 % |
| General Reads | 102739796 | 96.29 % | 51676434 | 96.86 % | 51063362 | 95.71 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 810009 | 0.76 % | 408616 | 0.77 % | 401393 | 0.75 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3150043 | 2.95 % | 1264874 | 2.37 % | 1885169 | 3.53 % |
| Bisulfite_reads C2T | 52756204 | 49.44 % | 26533745 | 49.74 % | 26222459 | 49.15 % |
| Bisulfite_reads G2A | 50793601 | 47.60 % | 25551305 | 47.89 % | 25242296 | 47.31 % |
| Concept | Value |
|---|---|
| Unique Fragments | 22427824 |
| Average Unique | 42.04 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 5619364114 | 34.88 % | 2886974512 | 35.84 % | 2732389602 | 33.92 % |
| Base Counts Overall C | 2340856084 | 14.53 % | 1239523036 | 15.39 % | 1101333048 | 13.67 % |
| Base Counts Overall G | 2545223231 | 15.80 % | 1195956185 | 14.85 % | 1349267046 | 16.75 % |
| Base Counts Overall T | 5497139756 | 34.12 % | 2679278212 | 33.26 % | 2817861544 | 34.98 % |
| Base Counts Overall N | 109093863 | 0.68 % | 54106579 | 0.67 % | 54987284 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9705373924740116 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 34589993 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 53349924 |
| 150 | 53349924 |
| Insert Size Histogram |
|---|
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