/TFF-PPG/PX0587_AGGCCG_10_lane_gembs/HHCHCCCXY_5_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 199181360 | 100.00 % | 99590680 | 100.00 % | 99590680 | 100.00 % |
| General Reads | 190810814 | 95.80 % | 97029665 | 97.43 % | 93781149 | 94.17 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1528821 | 0.77 % | 779986 | 0.78 % | 748835 | 0.75 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6841725 | 3.43 % | 1781029 | 1.79 % | 5060696 | 5.08 % |
| Bisulfite_reads C2T | 97940309 | 49.17 % | 49794513 | 50.00 % | 48145796 | 48.34 % |
| Bisulfite_reads G2A | 94399326 | 47.39 % | 48015138 | 48.21 % | 46384188 | 46.57 % |
| Concept | Value |
|---|---|
| Unique Fragments | 41806197 |
| Average Unique | 41.98 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 10508617115 | 34.94 % | 5453396414 | 36.26 % | 5055220701 | 33.62 % |
| Base Counts Overall C | 4326626272 | 14.39 % | 2287140482 | 15.21 % | 2039485790 | 13.56 % |
| Base Counts Overall G | 4772376259 | 15.87 % | 2187606493 | 14.55 % | 2584769766 | 17.19 % |
| Base Counts Overall T | 10267556545 | 34.14 % | 5009795422 | 33.31 % | 5257761123 | 34.96 % |
| Base Counts Overall N | 201209169 | 0.67 % | 100253869 | 0.67 % | 100955300 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9727332785407499 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 63880708 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 99590680 |
| 150 | 99590680 |
| Insert Size Histogram |
|---|
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