/TFF-PPG/PX0587_AGGCCG_10_lane_gembs/HHCHCCCXY_6_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 200036528 | 100.00 % | 100018264 | 100.00 % | 100018264 | 100.00 % |
| General Reads | 191762104 | 95.86 % | 97461399 | 97.44 % | 94300705 | 94.28 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1537673 | 0.77 % | 783146 | 0.78 % | 754527 | 0.75 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6736751 | 3.37 % | 1773719 | 1.77 % | 4963032 | 4.96 % |
| Bisulfite_reads C2T | 98452087 | 49.22 % | 50026042 | 50.02 % | 48426045 | 48.42 % |
| Bisulfite_reads G2A | 94847690 | 47.42 % | 48218503 | 48.21 % | 46629187 | 46.62 % |
| Concept | Value |
|---|---|
| Unique Fragments | 42096146 |
| Average Unique | 42.09 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 10559725769 | 34.96 % | 5477470102 | 36.27 % | 5082255667 | 33.65 % |
| Base Counts Overall C | 4348126856 | 14.40 % | 2295611647 | 15.20 % | 2052515209 | 13.59 % |
| Base Counts Overall G | 4783035066 | 15.83 % | 2195262672 | 14.54 % | 2587772394 | 17.13 % |
| Base Counts Overall T | 10312552898 | 34.14 % | 5033680156 | 33.33 % | 5278872742 | 34.95 % |
| Base Counts Overall N | 202075139 | 0.67 % | 100733287 | 0.67 % | 101341852 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9728767730191176 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 64334284 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 100018264 |
| 150 | 100018264 |
| Insert Size Histogram |
|---|
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