/TFF-PPG/PX0587_AGGCCG_10_lane_gembs/HHCHCCCXY_8_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 199922498 | 100.00 % | 99961249 | 100.00 % | 99961249 | 100.00 % |
| General Reads | 191753667 | 95.91 % | 97440885 | 97.48 % | 94312782 | 94.35 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1543458 | 0.77 % | 786371 | 0.79 % | 757087 | 0.76 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6625373 | 3.31 % | 1733993 | 1.73 % | 4891380 | 4.89 % |
| Bisulfite_reads C2T | 98430583 | 49.23 % | 50009804 | 50.03 % | 48420779 | 48.44 % |
| Bisulfite_reads G2A | 94866542 | 47.45 % | 48217452 | 48.24 % | 46649090 | 46.67 % |
| Concept | Value |
|---|---|
| Unique Fragments | 42128776 |
| Average Unique | 42.15 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 10557399378 | 34.97 % | 5480891930 | 36.31 % | 5076507448 | 33.63 % |
| Base Counts Overall C | 4345799959 | 14.40 % | 2296252385 | 15.21 % | 2049547574 | 13.58 % |
| Base Counts Overall G | 4785493944 | 15.85 % | 2188393419 | 14.50 % | 2597100525 | 17.21 % |
| Base Counts Overall T | 10298373290 | 34.11 % | 5028104342 | 33.31 % | 5270268948 | 34.92 % |
| Base Counts Overall N | 201230627 | 0.67 % | 100506523 | 0.67 % | 100724104 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9725707633366222 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 64356392 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 99961249 |
| 150 | 99961249 |
| Insert Size Histogram |
|---|
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