/TFF-PPG/methylation/PX0587_AGGCCG_10_lane_gembs
BACK
SAMPLE PX0587_AGGCCG_10_lane_gembs
CpG counts
| Type |
Total |
Pass |
% |
| RefCpG |
26363323 |
18684677 |
70.87 % |
| NonRefCpG |
438080 |
114206 |
26.07 % |
Coverage CpGs
| Coverage Reference CpGs |
Coverage Information Reads Reference CpGs |
 |
 |
| Coverage Non Reference CpGs |
Coverage Information Reads Non-Reference CpGs |
 |
 |
Quality CpGs
| Genotype Quality Phred scaled Reference CpGs |
Genotype Quality Phred scaled Non-Reference CpGs |
 |
 |
Methylation CpGs
| CpGs Methylation Distribution |
 |
CpG Methylation Profile (From Individual Strands)
| Type |
#AllReferenceCpG |
% |
#PassedReferenceCpG |
% |
#AllNonReferenceCpG |
% |
#PassedNonReferenceCpG |
% |
| Unmethylated (0-0.3) |
7398939 |
14.59 % |
5678275 |
14.04 % |
232995 |
30.54 % |
37896 |
12.14 % |
| Intermediate (0.3-0.7) |
11142466 |
21.97 % |
7208710 |
17.83 % |
213092 |
27.93 % |
68582 |
21.97 % |
| Methylated (0.7-1) |
32169792 |
63.44 % |
27550630 |
68.13 % |
316737 |
41.52 % |
205630 |
65.88 % |
| |
|
|
|
|
|
|
|
|
| Median Methylation |
0.800 |
|
0.830 |
|
0.590 |
|
0.810 |
|