/CEMT/A77955_1_lane_gembs

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SAMPLE A77955_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 991441112 100.00 % 495720556 100.00 % 495720556 100.00 %
General Reads 973008437 98.14 % 490201922 98.89 % 482806515 97.39 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 6165254 0.62 % 3101006 0.63 % 3064248 0.62 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 12267421 1.24 % 2417628 0.49 % 9849793 1.99 %
Bisulfite_reads C2T 499370500 50.37 % 251502216 50.73 % 247868284 50.00 %
Bisulfite_reads G2A 479803191 48.39 % 241800712 48.78 % 238002479 48.01 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 430806336
Average Unique 86.91 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 58553845203 39.11 % 23488552171 31.38 % 35065293032 46.85 %
Base Counts Overall C 15735562777 10.51 % 617741512 0.83 % 15117821265 20.20 %
Base Counts Overall G 15225212540 10.17 % 14508034736 19.38 % 717177804 0.96 %
Base Counts Overall T 59176783997 39.53 % 35734728387 47.74 % 23442055610 31.32 %
Base Counts Overall N 1016203395 0.68 % 504747150 0.67 % 511456245 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9949386692189521
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 474821229



Mapping Quality

Mapping Quality Histogram
A77955_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A77955_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HCTVVCCXY_1_2