/Martin Hirst/PX0720_TGCTGG_10_lane_gembs/HF7JYCCXY_8_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 163110040 | 100.00 % | 81555020 | 100.00 % | 81555020 | 100.00 % |
| General Reads | 159199324 | 97.60 % | 80375793 | 98.55 % | 78823531 | 96.65 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 837269 | 0.51 % | 422939 | 0.52 % | 414330 | 0.51 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 3073447 | 1.88 % | 756288 | 0.93 % | 2317159 | 2.84 % |
| Bisulfite_reads C2T | 81367587 | 49.89 % | 41080546 | 50.37 % | 40287041 | 49.40 % |
| Bisulfite_reads G2A | 78669006 | 48.23 % | 39718186 | 48.70 % | 38950820 | 47.76 % |
| Concept | Value |
|---|---|
| Unique Fragments | 30550533 |
| Average Unique | 37.46 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 8542319617 | 34.68 % | 4385089886 | 35.61 % | 4157229731 | 33.76 % |
| Base Counts Overall C | 3598770545 | 14.61 % | 1926163483 | 15.64 % | 1672607062 | 13.58 % |
| Base Counts Overall G | 4048028717 | 16.44 % | 1867076326 | 15.16 % | 2180952391 | 17.71 % |
| Base Counts Overall T | 8273413864 | 33.59 % | 4053781097 | 32.92 % | 4219632767 | 34.26 % |
| Base Counts Overall N | 167083297 | 0.68 % | 82697228 | 0.67 % | 84386069 | 0.69 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9716467352988607 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 51026245 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 81555020 |
| 150 | 81555020 |
| Insert Size Histogram |
|---|
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