/Martin Hirst/PX0720_TGCTGG_10_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1680425162 | 100.00 % | 840212581 | 100.00 % | 840212581 | 100.00 % |
| General Reads | 1633332118 | 97.20 % | 827376615 | 98.47 % | 805955503 | 95.92 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 8517695 | 0.51 % | 4314333 | 0.51 % | 4203362 | 0.50 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 38575349 | 2.30 % | 8521633 | 1.01 % | 30053716 | 3.58 % |
| Bisulfite_reads C2T | 834545903 | 49.66 % | 422716455 | 50.31 % | 411829448 | 49.01 % |
| Bisulfite_reads G2A | 807303910 | 48.04 % | 408974493 | 48.68 % | 398329417 | 47.41 % |
| Concept | Value |
|---|---|
| Unique Fragments | 311161565 |
| Average Unique | 37.03 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 87526221619 | 34.49 % | 45092934828 | 35.54 % | 42433286791 | 33.45 % |
| Base Counts Overall C | 37223244246 | 14.67 % | 19882643958 | 15.67 % | 17340600288 | 13.67 % |
| Base Counts Overall G | 41654759400 | 16.42 % | 19190930498 | 15.13 % | 22463828902 | 17.71 % |
| Base Counts Overall T | 85633239765 | 33.75 % | 41856161760 | 32.99 % | 43777078005 | 34.50 % |
| Base Counts Overall N | 1706734432 | 0.67 % | 849428687 | 0.67 % | 857305745 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9709906699632429 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 514672432 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| HF7JYCCXY_5_2 |
| HHFYJCCXY_5_2 |
| HHFYJCCXY_6_2 |
| HHFYJCCXY_7_2 |
| HCVFLCCXY_8_2 |
| HF7JYCCXY_8_2 |
| HHFYJCCXY_8_2 |
| HF7JYCCXY_6_2 |
| HF7JYCCXY_7_2 |
| HHFYJCCXY_4_2 |