/TFF-PPG/PX0587_ACCGGC_10_lane_gembs/HHCHCCCXY_7_2
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 188083932 | 100.00 % | 94041966 | 100.00 % | 94041966 | 100.00 % |
| General Reads | 179833478 | 95.61 % | 91565681 | 97.37 % | 88267797 | 93.86 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 1326884 | 0.71 % | 678169 | 0.72 % | 648715 | 0.69 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 6923570 | 3.68 % | 1798116 | 1.91 % | 5125454 | 5.45 % |
| Bisulfite_reads C2T | 92245680 | 49.04 % | 46959777 | 49.93 % | 45285903 | 48.15 % |
| Bisulfite_reads G2A | 88914682 | 47.27 % | 45284073 | 48.15 % | 43630609 | 46.39 % |
| Concept | Value |
|---|---|
| Unique Fragments | 38534361 |
| Average Unique | 40.98 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 9854010596 | 34.70 % | 5117990186 | 36.04 % | 4736020410 | 33.35 % |
| Base Counts Overall C | 4131058298 | 14.55 % | 2173814310 | 15.31 % | 1957243988 | 13.78 % |
| Base Counts Overall G | 4587997412 | 16.15 % | 2100788354 | 14.79 % | 2487209058 | 17.52 % |
| Base Counts Overall T | 9637892352 | 33.94 % | 4712888658 | 33.19 % | 4925003694 | 34.68 % |
| Base Counts Overall N | 189715074 | 0.67 % | 94855358 | 0.67 % | 94859716 | 0.67 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9718518261597737 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 59043678 |
| Mapping Quality Histogram |
|---|
| |
| Read Length | Reads |
|---|---|
| 150 | 94041966 |
| 150 | 94041966 |
| Insert Size Histogram |
|---|
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