/CEMT/A91239_2_lane_gembs

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SAMPLE A91239_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1555813154 100.00 % 777906577 100.00 % 777906577 100.00 %
General Reads 1442254557 92.70 % 727043761 93.46 % 715210796 91.94 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 6516365 0.42 % 3279005 0.42 % 3237360 0.42 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 107042232 6.88 % 47583811 6.12 % 59458421 7.64 %
Bisulfite_reads C2T 737571551 47.41 % 371652223 47.78 % 365919328 47.04 %
Bisulfite_reads G2A 711199371 45.71 % 358670543 46.11 % 352528828 45.32 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 631509928
Average Unique 81.18 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 90436257934 38.50 % 38689362629 32.94 % 51746895305 44.05 %
Base Counts Overall C 25877258072 11.01 % 2400981449 2.04 % 23476276623 19.99 %
Base Counts Overall G 26262807697 11.18 % 23583577665 20.08 % 2679230032 2.28 %
Base Counts Overall T 90763241674 38.63 % 51998940890 44.27 % 38764300784 33.00 %
Base Counts Overall N 1588220877 0.68 % 791030494 0.67 % 797190383 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9911925982537312
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 699424669



Mapping Quality

Mapping Quality Histogram
A91239_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A91239_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HL2VKCCXY_2_2
HL2VKCCXY_1_2