/Martin Hirst/PX0720_AAGCGA_10_lane_gembs
BACK| Concept | Total Reads | % | Pair One Reads | % | Pair Two Reads | % |
|---|---|---|---|---|---|---|
| Sequenced Reads | 1641376048 | 100.00 % | 820688024 | 100.00 % | 820688024 | 100.00 % |
| General Reads | 1606467174 | 97.87 % | 813414885 | 99.11 % | 793052289 | 96.63 % |
| Reads in Control sequences | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Reads under conversion control | 986356 | 0.06 % | 499927 | 0.06 % | 486429 | 0.06 % |
| Reads over conversion control | 0 | 0.00 % | 0 | 0.00 % | 0 | 0.00 % |
| Unmapped reads | 33922518 | 2.07 % | 6773212 | 0.83 % | 27149306 | 3.31 % |
| Bisulfite_reads C2T | 814212402 | 49.61 % | 412212875 | 50.23 % | 401999527 | 48.98 % |
| Bisulfite_reads G2A | 793241128 | 48.33 % | 401701937 | 48.95 % | 391539191 | 47.71 % |
| Concept | Value |
|---|---|
| Unique Fragments | 307169470 |
| Average Unique | 37.43 % |
| Concept | Total Bases | % | Pair One Bases | % | Pair Two Bases | % |
|---|---|---|---|---|---|---|
| Base Counts Overall A | 85749616387 | 34.60 % | 44136352857 | 35.62 % | 41613263530 | 33.58 % |
| Base Counts Overall C | 36012722711 | 14.53 % | 19161406257 | 15.46 % | 16851316454 | 13.60 % |
| Base Counts Overall G | 40324161449 | 16.27 % | 18675965579 | 15.07 % | 21648195870 | 17.47 % |
| Base Counts Overall T | 84094209943 | 33.93 % | 41120446434 | 33.18 % | 42973763509 | 34.68 % |
| Base Counts Overall N | 1667072758 | 0.67 % | 829720497 | 0.67 % | 837352261 | 0.68 % |
| Bisulfite Conversion Type | Conversion Rate |
|---|---|
| Conversion Rate | 0.9657109347004491 |
| Over Conversion Rate | NA |
| Concept | Total Reads |
|---|---|
| Correct Pairs | 498858755 |
| Mapping Quality Histogram |
|---|
| |
| Insert Size Histogram |
|---|
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| LANE REPORTS |
|---|
| HF7JYCCXY_7_2 |
| HF7JYCCXY_6_2 |
| HF7JYCCXY_8_2 |
| HF7JYCCXY_5_2 |
| HHFYJCCXY_7_2 |
| HHFYJCCXY_8_2 |
| HCVFLCCXY_8_2 |
| HHFYJCCXY_6_2 |
| HHFYJCCXY_4_2 |
| HHFYJCCXY_5_2 |