/EXTERNAL CREST/K006475_1_lane_gembs/JKU053.Bisulfite-Seq.DNA_Methylation.JGAX00000016561.JKU053_WGBS

BACK

SAMPLE K006475_1_lane_gembs LANE JKU053.Bisulfite-Seq.DNA_Methylation.JGAX00000016561.JKU053_WGBS

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 274897552 100.00 % 274897552 100.00 % 0 0.00 %
General Reads 266406422 96.91 % 266406422 96.91 % 0 0.00 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 833305 0.30 % 833305 0.30 % 0 0.00 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 7657825 2.79 % 7657825 2.79 % 0 0.00 %
Bisulfite_reads C2T 132998716 48.38 % 132998716 48.38 % 0 0.00 %
Bisulfite_reads G2A 134241011 48.83 % 134241011 48.83 % 0 0.00 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 188593848
Average Unique 70.57 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 13728970464 48.96 %
Base Counts Overall C 6188165840 22.07 %
Base Counts Overall G 287942903 1.03 %
Base Counts Overall T 7545297268 26.91 %
Base Counts Overall N 289173829 1.03 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.7973931356980439
Over Conversion Rate NA



Mapping Quality

Mapping Quality Histogram
JKU053.Bisulfite-Seq.DNA_Methylation.JGAX00000016561.JKU053_WGBS.mapq.png



Read Length

Read Length Reads
101 274897552