/EXTERNAL CREST/K006478_1_lane_gembs/CT27-EVT.Bisulfite-Seq.DNA_Methylation.JGAX00000015195.CT27-EVT_WGBS

BACK

SAMPLE K006478_1_lane_gembs LANE CT27-EVT.Bisulfite-Seq.DNA_Methylation.JGAX00000015195.CT27-EVT_WGBS

Mapping Stats (Reads)

Concept	Total Reads	%	Pair One Reads	%	Pair Two Reads	%
Sequenced Reads	389900041	100.00 %	389900041	100.00 %	0	0.00 %
General Reads	377599639	96.85 %	377599639	96.85 %	0	0.00 %
Reads in Control sequences	0	0.00 %	0	0.00 %	0	0.00 %
Reads under conversion control	3168944	0.81 %	3168944	0.81 %	0	0.00 %
Reads over conversion control	0	0.00 %	0	0.00 %	0	0.00 %
Unmapped reads	9131458	2.34 %	9131458	2.34 %	0	0.00 %
Bisulfite_reads C2T	189538994	48.61 %	189538994	48.61 %	0	0.00 %
Bisulfite_reads G2A	191229589	49.05 %	191229589	49.05 %	0	0.00 %

Uniqueness (Fragments)

Concept	Value
Unique Fragments	291175628
Average Unique	76.47 %

Mapping Stats (Bases)

Concept	Total Bases	%	Pair One Bases	%	Pair Two Bases	%
Base Counts Overall A	18815054137	49.75 %
Base Counts Overall C	8161797239	21.58 %
Base Counts Overall G	255778012	0.68 %
Base Counts Overall T	10183071457	26.92 %
Base Counts Overall N	404603132	1.07 %

Bisulfite Conversion Rate

Bisulfite Conversion Type	Conversion Rate
Conversion Rate	0.8563003265075501
Over Conversion Rate	NA

Mapping Quality

Mapping Quality Histogram

Read Length

Read Length	Reads
96	389900041