/CEMT/B19818_2_lane_gembs

BACK

SAMPLE B19818_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1945252272 100.00 % 972626136 100.00 % 972626136 100.00 %
General Reads 1927595080 99.09 % 966312891 99.35 % 961282189 98.83 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 667118 0.03 % 334547 0.03 % 332571 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 16990074 0.87 % 5978698 0.61 % 11011376 1.13 %
Bisulfite_reads C2T 990373536 50.91 % 496181573 51.01 % 494191963 50.81 %
Bisulfite_reads G2A 937888662 48.21 % 470465865 48.37 % 467422797 48.06 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 820249337
Average Unique 84.33 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 110462852666 37.61 % 44223512091 30.11 % 66239340575 45.10 %
Base Counts Overall C 35101517160 11.95 % 1671046121 1.14 % 33430471039 22.76 %
Base Counts Overall G 35195847100 11.98 % 33392888160 22.74 % 1802958940 1.23 %
Base Counts Overall T 110959337280 37.78 % 66582974912 45.34 % 44376362368 30.22 %
Base Counts Overall N 2013538866 0.69 % 996125252 0.68 % 1017413614 0.69 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9962236221478323
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 928910878



Mapping Quality

Mapping Quality Histogram
B19818_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B19818_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYLHCCXY_1_2
H23KLCCX2_1_2