/CEMT/B19818_2_lane_gembs/H23KLCCX2_1_2

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SAMPLE B19818_2_lane_gembs LANE H23KLCCX2_1_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 965537048 100.00 % 482768524 100.00 % 482768524 100.00 %
General Reads 956955181 99.11 % 479640625 99.35 % 477314556 98.87 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 330321 0.03 % 165641 0.03 % 164680 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 8251546 0.85 % 2962258 0.61 % 5289288 1.10 %
Bisulfite_reads C2T 491713611 50.93 % 246305885 51.02 % 245407726 50.83 %
Bisulfite_reads G2A 465571891 48.22 % 233500381 48.37 % 232071510 48.07 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 407389991
Average Unique 84.39 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 54877697441 37.64 % 21963029496 30.13 % 32914667945 45.15 %
Base Counts Overall C 17383103145 11.92 % 818305790 1.12 % 16564797355 22.72 %
Base Counts Overall G 17450490508 11.97 % 16564905491 22.72 % 885585017 1.21 %
Base Counts Overall T 55083907377 37.78 % 33060480016 45.35 % 22023427361 30.21 %
Base Counts Overall N 1000895777 0.69 % 491326331 0.67 % 509569446 0.70 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9964854930910784
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 461231158



Mapping Quality

Mapping Quality Histogram
H23KLCCX2_1_2.mapq.png



Read Length

Read Length Reads
150 482768524
150 482768524



Insert Size Plot

Insert Size Histogram
H23KLCCX2_1_2.isize.png