/CEMT/B19820_2_lane_gembs

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SAMPLE B19820_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 2004785458 100.00 % 1002392729 100.00 % 1002392729 100.00 %
General Reads 1989830675 99.25 % 997995824 99.56 % 991834851 98.95 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 687649 0.03 % 344772 0.03 % 342877 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14267134 0.71 % 4052133 0.40 % 10215001 1.02 %
Bisulfite_reads C2T 1019990706 50.88 % 511315582 51.01 % 508675124 50.75 %
Bisulfite_reads G2A 970527618 48.41 % 487025014 48.59 % 483502604 48.23 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 854349968
Average Unique 85.23 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 114861677486 37.94 % 45800041354 30.26 % 69061636132 45.63 %
Base Counts Overall C 35374226967 11.69 % 1678795081 1.11 % 33695431886 22.26 %
Base Counts Overall G 35071617503 11.59 % 33422107445 22.08 % 1649510058 1.09 %
Base Counts Overall T 115379666345 38.11 % 69446227161 45.88 % 45933439184 30.35 %
Base Counts Overall N 2035415857 0.67 % 1014131038 0.67 % 1021284819 0.67 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9957686207405285
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 962994431



Mapping Quality

Mapping Quality Histogram
B19820_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
B19820_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYJWCCXY_4_2
HYYJWCCXY_3_2