/CEMT/E00609_8_lane_gembs

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SAMPLE E00609_8_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1832923442 100.00 % 916461721 100.00 % 916461721 100.00 %
General Reads 1762389465 96.15 % 887701493 96.86 % 874687972 95.44 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 14526376 0.79 % 7373091 0.80 % 7153285 0.78 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 56007601 3.06 % 21387137 2.33 % 34620464 3.78 %
Bisulfite_reads C2T 904306110 49.34 % 455463508 49.70 % 448842602 48.98 %
Bisulfite_reads G2A 872609731 47.61 % 439611076 47.97 % 432998655 47.25 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 291107245
Average Unique 31.76 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 97597008766 35.26 % 51203421115 37.00 % 46393587651 33.52 %
Base Counts Overall C 41508724014 15.00 % 23210917979 16.77 % 18297806035 13.22 %
Base Counts Overall G 42486000431 15.35 % 18725370651 13.53 % 23760629780 17.17 %
Base Counts Overall T 93312845579 33.71 % 44316459357 32.02 % 48996386222 35.41 %
Base Counts Overall N 1866860952 0.67 % 929550769 0.67 % 937310183 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9480714876637044
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 493070784



Mapping Quality

Mapping Quality Histogram
E00609_8_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
E00609_8_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYLHCCXY_2_2
HYYLHCCXY_5_2
HYYLHCCXY_6_2
HYYLHCCXY_3_2
HYYLHCCXY_7_2
HYYLHCCXY_4_2
HYYLHCCXY_8_2
HYCF2CCXY_2_2