/CEMT/E00611_8_lane_gembs

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SAMPLE E00611_8_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1712680098 100.00 % 856340049 100.00 % 856340049 100.00 %
General Reads 1646575930 96.14 % 828916142 96.80 % 817659788 95.48 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 13660497 0.80 % 6933034 0.81 % 6727463 0.79 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 52443671 3.06 % 20490873 2.39 % 31952798 3.73 %
Bisulfite_reads C2T 844550012 49.31 % 425149614 49.65 % 419400398 48.98 %
Bisulfite_reads G2A 815686415 47.63 % 410699562 47.96 % 404986853 47.29 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 270769890
Average Unique 31.62 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 91085015499 35.22 % 47866101594 37.02 % 43218913905 33.42 %
Base Counts Overall C 38799070503 15.00 % 21810371710 16.87 % 16988698793 13.14 %
Base Counts Overall G 39969159844 15.46 % 17530077811 13.56 % 22439082033 17.35 %
Base Counts Overall T 87016797011 33.65 % 41232119405 31.89 % 45784677606 35.41 %
Base Counts Overall N 1744651941 0.67 % 868676879 0.67 % 875975062 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.946269918381987
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 459910882



Mapping Quality

Mapping Quality Histogram
E00611_8_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
E00611_8_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYYLHCCXY_8_2
HYYLHCCXY_6_2
HYYLHCCXY_7_2
HYYLHCCXY_5_2
HYYLHCCXY_3_2
HYCF2CCXY_2_2
HYYLHCCXY_2_2
HYYLHCCXY_4_2