/CEMT/A95342_2_lane_gembs

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SAMPLE A95342_2_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1937117622 100.00 % 968558811 100.00 % 968558811 100.00 %
General Reads 1922391578 99.24 % 963965588 99.53 % 958425990 98.95 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 551832 0.03 % 276629 0.03 % 275203 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 14174212 0.73 % 4316594 0.45 % 9857618 1.02 %
Bisulfite_reads C2T 991232821 51.17 % 496712575 51.28 % 494520246 51.06 %
Bisulfite_reads G2A 931710589 48.10 % 467529642 48.27 % 464180947 47.92 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 814135954
Average Unique 84.06 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 110056137450 37.63 % 46307761771 31.66 % 63748375679 43.59 %
Base Counts Overall C 35115126541 12.00 % 1572531656 1.08 % 33542594885 22.93 %
Base Counts Overall G 34943302605 11.95 % 33352814747 22.80 % 1590487858 1.09 %
Base Counts Overall T 110411746182 37.75 % 64039222933 43.79 % 46372523249 31.71 %
Base Counts Overall N 1978448144 0.68 % 980049354 0.67 % 998398790 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9959134146566256
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 926151968



Mapping Quality

Mapping Quality Histogram
A95342_2_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
A95342_2_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
HYHL2CCXY_7_2
HYHL2CCXY_8_2