/CEMT/A95342_2_lane_gembs/HYHL2CCXY_8_2

BACK

SAMPLE A95342_2_lane_gembs LANE HYHL2CCXY_8_2

Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 974898082 100.00 % 487449041 100.00 % 487449041 100.00 %
General Reads 967691191 99.26 % 485175984 99.53 % 482515207 98.99 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 279061 0.03 % 139869 0.03 % 139192 0.03 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 6927830 0.71 % 2133188 0.44 % 4794642 0.98 %
Bisulfite_reads C2T 498955198 51.18 % 249992932 51.29 % 248962266 51.07 %
Bisulfite_reads G2A 469015054 48.11 % 235322921 48.28 % 233692133 47.94 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 410011075
Average Unique 84.11 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 55394145972 37.63 % 23310244165 31.67 % 32083901807 43.59 %
Base Counts Overall C 17657807875 12.00 % 782840405 1.06 % 16874967470 22.93 %
Base Counts Overall G 17590453830 11.95 % 16786162787 22.81 % 804291043 1.09 %
Base Counts Overall T 55572024929 37.75 % 32231956448 43.79 % 23340068481 31.71 %
Base Counts Overall N 995177776 0.68 % 493601386 0.67 % 501576390 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.995929172889563
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 466301653



Mapping Quality

Mapping Quality Histogram
HYHL2CCXY_8_2.mapq.png



Read Length

Read Length Reads
150 487449041
150 487449041



Insert Size Plot

Insert Size Histogram
HYHL2CCXY_8_2.isize.png