/cemt/K005739_0_lane_gembs

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SAMPLE K005739_0_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1674195226 100.00 % 837097613 100.00 % 837097613 100.00 %
General Reads 1609706307 96.15 % 801495911 95.75 % 808210396 96.55 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 4004260 0.24 % 2009746 0.24 % 1994514 0.24 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 60484659 3.61 % 33591956 4.01 % 26892703 3.21 %
Bisulfite_reads C2T 819996013 48.98 % 408200840 48.76 % 411795173 49.19 %
Bisulfite_reads G2A 793714554 47.41 % 395304817 47.22 % 398409737 47.59 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 554689843
Average Unique 66.26 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 97230182128 38.46 % 42318959803 33.48 % 54911222325 43.44 %
Base Counts Overall C 27521313708 10.89 % 3055229789 2.42 % 24466083919 19.36 %
Base Counts Overall G 29355048690 11.61 % 25159762374 19.90 % 4195286316 3.32 %
Base Counts Overall T 96981945810 38.36 % 55009351789 43.52 % 41972594021 33.21 %
Base Counts Overall N 1714988790 0.68 % 858435808 0.68 % 856552982 0.68 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9871999214457822
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 612102360



Mapping Quality

Mapping Quality Histogram
K005739_0_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005739_0_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF825LGU_150bp_chastity