/cemt/methylation/K005739_0_lane_gembs

BACK

SAMPLE K005739_0_lane_gembs




CpG counts

Type Total Pass %
RefCpG 26750775 14919358 55.77 %
NonRefCpG 332483 134307 40.40 %

Coverage CpGs




Coverage Reference CpGs Coverage Information Reads Reference CpGs
./IMG//K005739_0_lane_gembs_coverage_refCpG.png ./IMG//K005739_0_lane_gembs_coverage_refCpGInf.png



Coverage Non Reference CpGs Coverage Information Reads Non-Reference CpGs
./IMG//K005739_0_lane_gembs_coverage_nonRefCpG.png ./IMG//K005739_0_lane_gembs_coverage_nonRefCpGinf.png

Quality CpGs




Genotype Quality Phred scaled Reference CpGs Genotype Quality Phred scaled Non-Reference CpGs
./IMG//K005739_0_lane_gembs_quality_refcpg.png ./IMG//K005739_0_lane_gembs_quality_nonRefCpg.png

Methylation CpGs




CpGs Methylation Distribution
./IMG//K005739_0_lane_gembs_methylation_levels.png

CpG Methylation Profile (From Individual Strands)

Type #AllReferenceCpG % #PassedReferenceCpG % #AllNonReferenceCpG % #PassedNonReferenceCpG %
Unmethylated (0-0.3) 6196762 12.45 % 2411204 7.16 % 142673 23.29 % 40495 11.55 %
Intermediate (0.3-0.7) 15096643 30.33 % 8735805 25.94 % 187005 30.53 % 99413 28.35 %
Methylated (0.7-1) 28474323 57.21 % 22529499 66.90 % 282846 46.18 % 210719 60.10 %
Median Methylation 0.750 0.810 0.660 0.770