/cemt/K005728_1_lane_gembs

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SAMPLE K005728_1_lane_gembs




Mapping Stats (Reads)

Concept Total Reads % Pair One Reads % Pair Two Reads %
Sequenced Reads 1843195392 100.00 % 921597696 100.00 % 921597696 100.00 %
General Reads 1816615952 98.56 % 913653719 99.14 % 902962233 97.98 %
Reads in Control sequences 0 0.00 % 0 0.00 % 0 0.00 %
Reads under conversion control 6865178 0.37 % 3451116 0.37 % 3414062 0.37 %
Reads over conversion control 0 0.00 % 0 0.00 % 0 0.00 %
Unmapped reads 19714262 1.07 % 4492861 0.49 % 15221401 1.65 %
Bisulfite_reads C2T 912773315 49.52 % 458837351 49.79 % 453935964 49.26 %
Bisulfite_reads G2A 910707815 49.41 % 458267484 49.73 % 452440331 49.09 %



Uniqueness (Fragments)

Concept Value
Unique Fragments 673739247
Average Unique 73.11 %



Mapping Stats (Bases)

Concept Total Bases % Pair One Bases % Pair Two Bases %
Base Counts Overall A 109045716675 39.18 % 47303905485 33.99 % 61741811190 44.37 %
Base Counts Overall C 29178698182 10.48 % 1481689281 1.06 % 27697008901 19.90 %
Base Counts Overall G 29522778689 10.61 % 27764401450 19.95 % 1758377239 1.26 %
Base Counts Overall T 108597551182 39.02 % 61676629093 44.32 % 46920922089 33.72 %
Base Counts Overall N 1977759464 0.71 % 934626787 0.67 % 1043132677 0.75 %



Bisulfite Conversion Rate

Bisulfite Conversion Type Conversion Rate
Conversion Rate 0.9923642092343115
Over Conversion Rate NA



Correct Pairs

Concept Total Reads
Correct Pairs 750720466



Mapping Quality

Mapping Quality Histogram
K005728_1_lane_gembs.mapq.png



Insert Size Plot

Insert Size Histogram
K005728_1_lane_gembs.isize.png



Mapping Lanes Reports

LANE REPORTS
ENCFF689OWR_150bp_chastity